BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011B01LP1|AL426148
(793 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig461 653 0.0
3x_Contig569 216 5e-56
>3x_Contig461
Length = 1467
Score = 653 bits (323), Expect = 0.0
Identities = 357/379 (94%)
Strand = Plus / Minus
Query: 415 attattcyacyaatgcgacttgcyaacaaatggggttttaaaagggaattcygagttgac 474
||||||| || |||||||||||| |||||||||||| ||||||||||||| ||||||||
Sbjct: 1467 attattctactaatgcgacttgctaacaaatggggtggtaaaagggaattctgagttgac 1408
Query: 475 tttgttatctttgattccgatgattgtcatgtctgcmcyttaaagcycatgtttttttcy 534
|||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||||
Sbjct: 1407 tttgttatctttgattccgatgattgtcatgtctgcactttaaagctcatgggtttttct 1348
Query: 535 agcaccytacacatgcyttcmatggttcccccttcyttgagttcyagaattgtacygtct 594
|||||| ||||||||| ||| |||||||||| ||| |||||||| |||||||||| ||||
Sbjct: 1347 agcaccttacacatgctttcaatggttcccctttctttgagttctagaattgtactgtct 1288
Query: 595 ccctattaaggtctccmttgttcatcaaatattacgcytggtatttttgccaaatcaaac 654
|| ||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1287 ccttattaaggtctccattgttcatcaaatattacgcttggtatttttgccaaatcaaac 1228
Query: 655 atgggctattctttttcccccaaggatttacaacttttattcttgccattgatgcatggg 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1227 atgggctattctttttcccccaaggatttacaacttttattcttgccattgatgcatggg 1168
Query: 715 tgaaaacgaatcaggtcggaaaatttgaaataggaaaatctcgagatattccgaattggg 774
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1167 tgaaaacgaatcaggtcggaaaatttgaaataggaaaatctcgagatattccgaattggg 1108
Query: 775 caacaaaagaaaattcaaa 793
|||||||||||||||||||
Sbjct: 1107 caacaaaagaaaattcaaa 1089
>3x_Contig569
Length = 3008
Score = 216 bits (107), Expect = 5e-56
Identities = 114/115 (99%), Gaps = 1/115 (0%)
Strand = Plus / Plus
Query: 1 caattatttctacgaacaaatctaagatttgcgtagaaacaagggtagtatatactgcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2882 caattatttctacgaacaaatctaagatttgcgtagaaacaagggtagtatatactgcag 2941
Query: 61 ggttaagataaagttgaattttctgttacytttttcctccaaagaatcgtaggtg 115
||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2942 ggttaagataaagttgaattttctgttac-tttttcctccaaagaatcgtaggtg 2995
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,225
Number of Sequences: 1807
Number of extensions: 11225
Number of successful extensions: 156
Number of sequences better than 1.0e-20: 2
length of query: 793
length of database: 10,358,551
effective HSP length: 16
effective length of query: 777
effective length of database: 10,329,639
effective search space: 8026129503
effective search space used: 8026129503
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.7 bits)
S2: 49 (99.5 bits)